AI Revolution In Toxicology: Smarter, Faster, Safer
The field of toxicology, which studies the harmful effects of chemicals on living organisms and the environment, is undergoing a transformation driven by artificial intelligence (AI). As toxicology moves away from relying on animal experiments and towards analyzing vast amounts of data from high-throughput screening tests and other modern technologies, AI provides powerful tools to process and interpret this information.
Machine learning — particularly deep learning — has been successfully used to predict toxicity, analyze large datasets, extract knowledge from scientific literature, and even generate synthetic data to fill in gaps in experimental results. For instance, deep learning models have been able to predict chemical mutagenicity (the ability to cause genetic mutations) with over 90% accuracy compared to traditional animal tests. These AI-based predictive models, built using existing data, can help prioritize chemicals for further testing and reduce the need for animal studies.
Natural language processing (NLP) techniques are being used to automate the process of gathering evidence from vast amounts of scientific publications and historical toxicity reports. NLP can extract structured information about chemical toxicity and relationships between biological entities, allowing researchers to make better use of existing knowledge and reduce the need for repeated animal testing.
Modern toxicology is also shifting its focus from observing animal endpoints to measuring biological activity in human-relevant cell-based assays. AI techniques like deep learning are well-suited to integrate information from these diverse data streams to predict toxicity. Projects like ONTOX aim to use AI models built on cell-based assays and toxicokinetic data (how a substance moves through the body) to predict systemic toxicity while minimizing animal testing. Another important aspect of replacing animal use is quantitative in vitro to in vivo extrapolation.
In addition to advancing research, AI is enabling more quantitative and transparent risk assessment to guide safety decisions and policies. Probabilistic modeling better captures uncertainty and variability for a given population. Explanation techniques are improving the interpretability of complex AI models, helping to build trust and provide mechanistic insights.
However, there are still some key challenges in adopting AI in toxicology. AI models can reinforce biases present in their training data, which may lead to inaccurate predictions. Ensuring that datasets are well-curated, representative, and unbiased is crucial for developing reliable AI models. Complex AI architectures, such as deep neural networks, can also be difficult to interpret, which hinders their acceptance by regulators who require clear reasoning for decision-making. More research on explainable AI techniques is needed to shed light on these “black-box” models and provide insights into their predictions.
Integrating AI in toxicology also requires collaboration across disciplines, including data scientists, toxicologists, chemists, and risk assessors. Educational programs that build data science skills within the toxicology community would help accelerate AI adoption and bridge communication gaps. Additionally, differences in data formats, lack of standardized terminology, and minimal reporting standards can make data integration and sharing challenging. Community efforts to develop data exchange protocols, reporting guidelines, and standardized vocabularies are underway to address these issues.
Despite these challenges, AI presents exciting opportunities for toxicology. Beyond replacing animals, AI models trained on existing data can help prioritize chemicals for further testing, making toxicology more efficient and reducing animal use. AI can also provide on-demand toxicity predictions to a broader group of stakeholders, making safety information more accessible. Furthermore, AI has the potential to uncover new patterns and generate hypotheses from large-scale toxicology datasets, guiding future experiments and mechanistic research.
With strategic collaboration across disciplines and sectors, along with the development of best practices for responsible and transparent AI, this technology has immense potential to reduce animal testing and suffering while making toxicology more human-relevant, mechanistic, and predictive. The careful integration of AI as part of toxicology’s ongoing evolution away from animal testing is key to advancing the field and protecting both animal welfare and human health.
https://doi.org/10.1007/s00204-023-03666-2

